Jie, Wei (2015) SCAN: A Smart Application Platform for Empowering Parallelizations of Big Genomic Data Analysis in Clouds. In: The 44th International Conference on Parallel Processing (ICPP-2015), September 1-4, 2015, Beijing, China.
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Cloud computing is often adopted to process big
data for genome analysis due to its elasticity and pay-as-you-go features. In this paper, we present SCAN, a smart
application platform to facilitate parallelization of big genome analysis in clouds. With a knowledge base and an intelligent application scheduler, the SCAN enables better understanding of bio-applications’ characteristics, and helps to orchestrate huge, heterogeneous tasks efficiently and cost-effectively. We conducted a simulation study and found that the SCAN platform is able to improve the performance of genome analysis and reduce its cost in a wide variety of circumstances.
|Item Type:||Conference or Workshop Item (Paper)|
|Subjects:||Computer science, knowledge and information systems|
|Depositing User:||WEI JIE|
|Date Deposited:||07 Mar 2016 12:12|
|Last Modified:||25 Mar 2016 05:36|
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