SCAN: A Smart Application Platform for Empowering Parallelizations of Big Genomic Data Analysis in Clouds

Jie, Wei (2015) SCAN: A Smart Application Platform for Empowering Parallelizations of Big Genomic Data Analysis in Clouds. In: The 44th International Conference on Parallel Processing (ICPP-2015), September 1-4, 2015, Beijing, China.

[img]
Preview
PDF
icpp2015.pdf - Draft Version

Download (530kB) | Preview

Abstract

Cloud computing is often adopted to process big
data for genome analysis due to its elasticity and pay-as-you-go features. In this paper, we present SCAN, a smart
application platform to facilitate parallelization of big genome analysis in clouds. With a knowledge base and an intelligent application scheduler, the SCAN enables better understanding of bio-applications’ characteristics, and helps to orchestrate huge, heterogeneous tasks efficiently and cost-effectively. We conducted a simulation study and found that the SCAN platform is able to improve the performance of genome analysis and reduce its cost in a wide variety of circumstances.

Item Type: Conference or Workshop Item (Paper)
Subjects: Computer science, knowledge and information systems
Depositing User: WEI JIE
Date Deposited: 07 Mar 2016 12:12
Last Modified: 25 Mar 2016 05:36
URI: http://repository.uwl.ac.uk/id/eprint/1729

Downloads

Downloads per month over past year

Actions (login required)

View Item View Item

Menu